Tag Archives: Insects

Grad Student Aker Counts on Insects to Assess Marsh Health

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Ben Aker collects insects in Louisiana marshes using a sweep net. (Photo credit: Claudia Husseneder)

Estuarine marshes in coastal Louisiana face numerous threats such as sea-level rise, salt water intrusion, and contamination threats such as oil spills that can lead to marsh loss and changing habitats. Ben Aker collects insects from different habitats within coastal marshes and assesses their abundance and biodiversity. His research will help identify potential marsh health indicator species and generate baseline data for future research into marsh loss and habitat restoration efforts.

Ben is a master’s student with the Louisiana State University AgCenter’s Department of Entomology and a GoMRI Scholar with the project A study of horse fly (Tabanidae) populations and their food web dynamics as indicators of the effects of environmental stress on coastal marsh health.

His Path

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(L-R) Master’s students Darrius Davis and Ben Aker, Ph.D. student Mike Becker, research associate Erin Stevens, master’s student Patrick Rayle, and worker Julian Lucero travel to Louisiana marshes for insect collection. (Photo credit: Claudia Husseneder)

Ben’s interest in science was fueled by the passionate professors he met as a biology undergraduate student at the University of Wisconsin Whitewater. “I’ve never talked to a professor who wasn’t enthusiastic about their research, and I want to have a similar level of excitement about my work,” he said. Ben pursued a degree in ecology, evolution, and animal behavior and conducted undergraduate research on the distribution of predatory robber flies. He is continuing entomology research as a Louisiana State University master’s student studying coastal insects and their salinity-related distributions with Dr. Lane Foil and Dr. Claudia Husseneder’s coastal insect ecology team, which studies Deepwater Horizon impacts on Louisiana marshes.

“I want to use interesting organisms to help answer important ecological questions,” said Ben. “Our research seeks to highlight the importance of coastal insects and their potential use as tools for marsh conservation and ecological research.”

His Work

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Ben Aker dries out his boot after falling through a hole in the marsh while sweep netting. (Photo credit: Claudia Husseneder)

Ben’s research examines plant and insect biodiversity along salinity gradients using data collected during a year-long study (July 2018 – June 2019). He focuses on 18 Louisiana marsh sites in Barataria Bay and Caillou Bay designated as either low-, mid-, or high-salinity based on historical data. Using sweep nets, he collects insects monthly and identifies each insect to the family level. He also assesses average ground cover, dominant plant life, and biodiversity differences between salinity levels at all sites. He then uses the EstimateS biodiversity software to determine biodiversity in areas with different salinities and creates a rarefaction curve for each salinity level. Rarefaction curves plot the number of families observed in relation to the sample size and the estimated total families to determine if a sampling effort can sufficiently assess diversity.

Preliminary results from data collected during the first five months show that each salinity level had differences in overall plant composition, but Spartina cordgrass species consistently dominated ground cover (Spartina patens at low- and mid-salinity sites and Spartina alterniflora at high-salinity sites). Chironomids (non-biting midges) were the most abundant insect family at low-salinity sites but were replaced by Delphacids (plant hoppers) as salinity increased. Results from the insect biodiversity indices suggest that family-level biodiversity decreased with increasing salinity. Further sampling is required to adequately assess insect diversity, which will come as Ben processes the remaining data. “Overall, we captured a conservative estimate of approximately 89.3 – 99.3% of families present,” explained Ben. “This high percentage of families collected is expected to increase as we complete a full year of sampling.”

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A black-headed melyrid (Collops nigriceps) from the Melyridae family, one of the many insect families Ben Aker identified during his marsh research. (Photo credit: Nathan Lord)

Ben utilizes his research findings to identify potential bioindicators of marsh health. He observed that most insect families appeared at all salinity levels and that only rare species were unique to a single salinity level. Since rare species are inefficient bioindicators, he instead uses a specificity measure (how well the potential bioindicator predicts the salinity level) and a fidelity measure (how likely it is that the potential bioindicator will be encountered at that salinity level) to associate insect families with different salinities. So far, he has associated fifteen insect families among the different salinity levels and combinations of salinity levels.

“It is likely that these insect families are associated with [certain] salinities due to life cycle requirements or herbivory of specific plants,” said Ben. “For example, two families associated with low-salinity sites (Chironomidae and Coenagrionidae) have aquatic juveniles to which higher salinity levels may be detrimental, and a family associated with high-salinity sites (Blissidae) is represented in our collection by a single species that feeds primarily on Spartina alterniflora.”

Ben is currently identifying members of the associated bioindicator families to the species level. He and Co-Principal Investigator Dr. Claudia Husseneder will conduct DNA barcoding on key species within indicator families, which will allow students or researchers with minimal taxonomic training to easily identify important insects for future coastal studies. The insect inventory generated by Ben’s research also provides comparative baseline data that researchers can use to observe how insect communities change following stress-induced marsh loss or following marsh recovery resulting from habitat management.

His Learning

Dr. Foil’s multidisciplinary background showed Ben that being well-read across multiple fields could help him contextualize his research in the greater picture. He put this concept into practice at the annual Gulf of Mexico Oil Spill and Ecosystem Science (GoMOSES) conference, which facilitates interdisciplinary and cross-institutional collaboration. “The most important aspect of the GoMRI science community to me is the ability to interact and cooperate with other GoMRI associated labs,” Ben said. “Following the 2018 GoMOSES conference, I participated in a Seaside Sparrow workshop with the Taylor and Stouffer labs from Louisiana State University’s School of Renewable Natural Resources (see Smithsonian Highlights CWC Research on Seaside Sparrows). Because they focus on the Seaside Sparrow diet, I am providing a DNA barcode database of salt marsh insects to compare their samples against.”

His Future

Ben plans to pursue a Ph.D. and continue his insect and ecology-related education. He advises students considering a scientific career to take statistics and scientific writing courses when they are available, “It’s easy to focus just on the research occurring in your specific field and overlook the importance of study design and being able to communicate your results.”

Praise for Ben

Dr. Foil praised Ben’s ability to adapt to challenging work conditions. He explained that Ben did as the locals do to handle the brutal heat and harsh conditions (hats, sunscreen, hydration, seeking shade) during two-day biweekly boat trips to collection sites, implementing two collection strategies, and sorting thousands of insects. While baseline animal population data prior to Deepwater Horizon was severely lacking, Dr. Foil said that Ben and his fellow graduate students are addressing these gaps using various techniques that mix DNA sequencing with classic taxonomy. “Saltwater intrusion and fresh water diversions are inevitable in the changing coastal habitats,” said Dr. Foil. “Hopefully, Ben will provide valuable data for use in evaluating these effects on biological communities.”

The GoMRI community embraces bright and dedicated students like Ben Aker and their important contributions. The GoMRI Scholars Program recognizes graduate students whose work focuses on GoMRI-funded projects and builds community for the next generation of ocean science professionals.

By Stephanie Ellis and Nilde Maggie Dannreuther. Contact sellis@ngi.msstate.edu for questions or comments.

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The Gulf of Mexico Research Initiative (GoMRI) is a 10-year independent research program established to study the effect, and the potential associated impact, of hydrocarbon releases on the environment and public health, as well as to develop improved spill mitigation, oil detection, characterization and remediation technologies. An independent and academic 20-member Research Board makes the funding and research direction decisions to ensure the intellectual quality, effectiveness and academic independence of the GoMRI research. All research data, findings and publications will be made publicly available. The program was established through a $500 million financial commitment from BP. For more information, visit https://gulfresearchinitiative.org/.

© Copyright 2010-2019 Gulf of Mexico Research Initiative (GoMRI) – All Rights Reserved. Redistribution is encouraged with acknowledgement to the Gulf of Mexico Research Initiative (GoMRI). Please credit images and/or videos as done in each article. Questions? Contact web-content editor Nilde “Maggie” Dannreuther, Northern Gulf Institute, Mississippi State University (maggied@ngi.msstate.edu).

Grad Student Bhalerao Analyzes Food Webs of Horse Fly Larvae to Assess Marsh Health

Devika and Chinmay Tikhe floating tabanid larvae out of marsh sediments. (Photo by Claudia Husseneder)

Devika and Chinmay Tikhe floating tabanid larvae out of marsh sediments. (Photo by Claudia Husseneder)

Greenhead horse fly larvae are the top invertebrate predator in the Spartinamarshes along the Gulf of Mexico coastline. Adult and larval horseflies exhibited reduced genetic variation and population declines in oiled marshes after the Deepwater Horizon oil spill, which suggests that these organisms could be an indicator species for post-spill marsh health. Devika Bhalerao uses DNA analyses to identify organisms important to the larvae’s survival and determine if oiling alters the presence of various organisms in the food web. Her findings will help develop analytical tools that ecologists can use to evaluate the health of tidal marshes.

Devika is an entomology master’s student at Louisiana State University (LSU) and a GoMRI Scholar with the GoMRI-funded project A Study of Horse Fly (Tabanidae) Populations and Their Food Web Dynamics as Indicators of the Effects of Environmental Stress on Coastal Marsh Health led by Lane Foil and Claudia Husseneder.

Her Path

Devika Bhalerao. (Photo by Claudia Husseneder)

Devika Bhalerao. (Photo by Claudia Husseneder)

Devika’s love for biology began when her mother taught biology to local children in Devika’s childhood home of India. Devika discovered a more focused interest in molecular biology and genomic research while studying as a microbiology undergraduate student at Pune University in India. She gained more genomics experience through the Pune University microbiology master’s program where she used metagenomics to decode the microbiome of the rural Indian population.

Devika attended a presentation about using metagenomics in insect systems given by Chinmay Tikhe, a Ph.D. student in Dr. Claudia Husseneder’s LSU Agricultural Center lab. She contacted Husseneder to learn more about their project and the use of metagenomics to describe the food web of horsefly larvae in Louisiana marshes. “The prospect of using the latest techniques such as next-generation sequencing and metagenomics bioinformatics to figure out how the marsh ecosystem functioned made me excited about this research,” she said. Devika joined the Husseneder lab in spring 2015 as an entomology master’s student.

Her Work

A greenhead horse fly larva. (Photo by Claudia Husseneder)

A greenhead horse fly larva. (Photo by Claudia Husseneder)

Devika analyzes the greenhead horse fly larval food web to identify organisms in marsh soil that are important for sustaining this top invertebrate predator. She extracts DNA from the larvae’s gut contents and the surrounding sediments from oiled and unoiled marshes and multiplies a specific DNA region called the 18SrRNA gene using the polymerase chain reaction (PCR) amplification technique. She then applies next-generation sequencing to the 18SrRNA gene and compares the resulting sequences to a gene database to identify the organisms present in the gut contents and sediment. This information helps her analyze which organisms in the marsh soil are important for sustaining the greenhead horse fly larvae.

An adult greenhead horse fly. (Photo by Claudia Husseneder)

An adult greenhead horse fly. (Photo by Claudia Husseneder)

Devika’s research has shown that most species that are present in the larvae’s gut contents belong to insect and fungi families. Her next steps will compare food webs from oiled and unoiled areas to identify if any food web components are missing from oiled marshes. She and her colleagues will use the bioindicators that she identifies to develop a cost-efficient and user-friendly PCR tool capable of determining marsh health.

“My research is the first study of an apex invertebrate predator food web in coastal Spartina marshes with the purpose of identifying the food web’s key elements,” said Devika. “Since greenhead horse flies are associated with Spartina marshes spanning from Texas to Nova Scotia, this study could develop techniques that can monitor the health of coastal marshes across the entire eastern United States.”

Her Learning

Working in Husseneder’s lab taught Devika how difficult it can be to collect larvae in the field. The collection process requires the entire team to devote considerable amounts of time, diligence, and patience to processing many buckets of sediment for only a few larvae. She considers attending the 2017 Benthic Invertebrates, Metagenomics, and Bioinformatics (BITMaB) workshop organized by GoMRI researcher Dr. Kelley Thomas to be the greatest advantage she experienced as a member of the GoMRI scientific community. “The workshop was a game changer in my research,” she said. “I could use the techniques I learned at the workshop to conduct the bioinformatics of my study myself. In my pursuit to acquire advanced molecular techniques, learning to use Quantitative Insights into Microbial Ecology (QIIME) techniques was the cherry on the cake.”

Devika standing by her poster at an entomology conference. (Provided by Claudia Husseneder)

Devika standing by her poster at an entomology conference. (Provided by Claudia Husseneder)

Devika has won several awards for her poster and oral presentations, including the 2016 International Congress of Entomology’s Graduate Student Poster Competition award for ecology and population dynamics and a travel award for the LSU Coastal Connections Competition. “The presentation that won me the travel award was extremely challenging, because I had to explain my entire research in three minutes in layman’s terms using only two slides without animation,” she said. She also won the Outstanding Masters Oral Presentation Competition at the 2017 Annual Meeting of the Southeastern Branch of the Entomological Society of America. “This award was memorable because later at an informal meeting one of the judges commended me on my presentation and said that it stood out,” recalls Devika.

Her Future

Devika plans to pursue a Ph.D. program that uses her molecular biology skills. She advises students considering a career in science to find ways to expand their skill sets. “Keep updating your current skill set and acquiring new skills in your field and stay abreast of the latest research in fields besides your own,” she said. “It can open avenues to apply your skill sets in new systems.”

Praise for Devika

Husseneder described Devika as a bright and dedicated student with a knack for figuring things out – a perfect fit for a project handling massive amounts of data and statistics. Even after the BITMaB workshop ended, Devika continued teaching herself how to use the complex statistics associated with environmental metagenomics, which she shares with students from other departments. She also teaches undergraduate students and fellow graduate students how to use DNA sequencing to identify arthropods found in marshes. “Devika is an invaluable part of our team,” said Husseneder.

Devika (middle row, center) and Husseneder (middle row, far right) pose for a group photo with their research team. (Photo by Claudia Husseneder)

Devika (middle row, center) and Husseneder (middle row, far right) pose for a group photo with their research team. (Photo by Claudia Husseneder)

The GoMRI community embraces bright and dedicated students like Devika Bhalerao and their important contributions. The GoMRI Scholars Program recognizes graduate students whose work focuses on GoMRI-funded projects and builds community for the next generation of ocean science professionals.

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The Gulf of Mexico Research Initiative (GoMRI) is a 10-year independent research program established to study the effect, and the potential associated impact, of hydrocarbon releases on the environment and public health, as well as to develop improved spill mitigation, oil detection, characterization and remediation technologies. An independent and academic 20-member Research Board makes the funding and research direction decisions to ensure the intellectual quality, effectiveness and academic independence of the GoMRI research. All research data, findings and publications will be made publicly available. The program was established through a $500 million financial commitment from BP. For more information, visit http://gulfresearchinitiative.org/.

© Copyright 2010- 2017 Gulf of Mexico Research Initiative (GoMRI) – All Rights Reserved. Redistribution is encouraged with acknowledgement to the Gulf of Mexico Research Initiative (GoMRI). Please credit images and/or videos as done in each article. Questions? Contact web-content editor Nilde “Maggie” Dannreuther, Northern Gulf Institute, Mississippi State University (maggied@ngi.msstate.edu).

Grad Student Chen Knows Ants Are More Than Just Bugs – They’re Oil Detectors!

Xuan (right) and Ben Adams, AKA “Max,” (left) collect insects in Louisiana marshes using a vacuum. (Photo provided by Xuan Chen)

Xuan (right) and Ben Adams, AKA “Max,” (left) collect insects in Louisiana marshes using a vacuum. (Photo provided by Xuan Chen)

Can watching ants really contribute to understanding an oil spill? Yes, it can! Ants have acted as indicators of environmental change in the past.

After oil from the Deepwater Horizon spill entered his research sites, Xuan Chen began uncovering new ways that ants can act as bioindicators of oil’s presence in and impacts on Louisiana marshes.

Xuan is a Ph.D. entomology student at Louisiana State University (LSU) and a GoMRI Scholar with Coastal Waters Consortium (CWC). He shares his path into oil spill research and the exciting developments of his evolving study.

His Path

Xuan has adored bugs ever since an undergraduate course at China Agricultural University introduced him to the fascinating world of insects.

Xuan (left) and Dr. Linda Hooper-Bui (right) check up on the marshes following Tropical Storm Lee. (Photo provided by Xuan Chen)

Xuan (left) and Dr. Linda Hooper-Bui (right) check up on the marshes following Tropical Storm Lee. (Photo provided by Xuan Chen)

He “fell in love” with social insects—insects that live and work cooperatively together—because of their diversity, behavior, and contributions to ecosystem health. After completing his master’s work researching bee taxonomy and pollination biology, Xuan developed an interest in ant ecology. He began searching for professors in that field and contacted Dr. Linda Hooper-Bui, an entomologist specializing in fire ants at LSU. “His application really stood out,” says Dr. Hooper-Bui. “I got a gut feeling when I talked with him, and he’s been my right-hand man from day one.”

Xuan soon started his doctoral research examining the distribution and community structure of ants in coastal ecosystems. By April 2010, he had visited 95 different marsh and dune sites from Louisiana to Florida. When the Deepwater Horizon oil spill occurred, Xuan received a call for help from Dr. Hooper-Bui—she was out of town and oil was headed for their Louisiana marsh sites. Despite a heavy end-of-semester schedule, Xuan hurried to the sites to collect more samples before the oil arrived. Using their pre-spill data, they would have the opportunity to study the oil’s effects on coastal ecosystems.

Xuan (right) and Brooke Hesson (left) en route to the marshes to collect insects and take soil samples. The boat’s captain, Jay Winters, can be seen in the background. (Photo provided by Xuan Chen)

Xuan (right) and Brooke Hesson (left) en route to the marshes to collect insects and take soil samples. The boat’s captain, Jay Winters, can be seen in the background. (Photo provided by Xuan Chen)

This early research led to Xuan’s participation on two short-term GoMRI Block Grant oil spill projects led by Hooper-Bui and also his role as a member of the CWC consortium research team.

His Work

Ants’ high sensitivity to their habitats makes them excellent bioindicators of environmental change, and the spill presented “an opportunity to see if ants can indicate oil pollution in coastal ecosystems.” Xuan explains that the diversity of ants strongly corresponds with other organisms. In addition, ants are not only important food resources for many animals but also ecosystem engineers that make big contributions to nutrition cycling and microhabitat modification. Xuan’s project is special because it is one of the few studies that focuses on changes in the diversity and species composition of ants as indication of oil presence. “I also study them because they are quite pretty under the microscope,” he jokes.

However, the ants’ lovely aesthetics did not reflect the conditions of conducting marsh field research. Sinking into the mud was a frequent problem, and Xuan and his colleagues would often walk on their knees just to create enough surface area to move forward. Hooper-Bui recalls Xuan’s incredible work ethic after Hurricane Isaac, when field work became even more difficult with no water or electricity at nearby camps. “He was right there the whole time,” she says. “He didn’t care about his personal suffering. He was just happily working, knowing that we were collecting valuable data.”

Xuan measures canopy cover in the Maurepus Swamp Wildlife Management Area using a spherical densitometer. (Photo provided by Xuan Chen)

Xuan measures canopy cover in the Maurepus Swamp Wildlife Management Area using a spherical densitometer. (Photo provided by Xuan Chen)

Xuan analyzes data from control and polluted sites using the before-after-control-impact (BACI) method to determine which environmental factors affect and regulate changes in the ant community. Although his data analysis is still ongoing, he is seeing differences in the structure of ant communities in oiled sites. Even three years after oiling, his work is showing that the ants have not returned to their pre-spill conditions. Xuan explained that the underlying mechanisms of the oil’s effects can be complex. Sometimes, oil may directly or indirectly kill ants. In other cases, it alters the ants’ foraging and nesting behaviors. He hopes that future research can make more definitive conclusions about the oil’s impacts on ant communities and coastal ecosystems.

His Learning

The most significant thing Xuan has learned from CWC is the importance of collaboration. While each lab may have a specific focus, he has found that “no single lab has all the resources necessary to study oil pollution’s effects on the entire ecosystem.” Xuan’s experience has shown him that through cooperation and data sharing, seemingly unrelated fields can enhance each other’s research and start piecing together the bigger picture.

His Future

Xuan uses an aspirator to collect ants from coastal dunes in Florida’s T.H. Stone Memorial St. Joseph Peninsula State Park. (Photo provided by Xuan Chen)

Xuan uses an aspirator to collect ants from coastal dunes in Florida’s T.H. Stone Memorial St. Joseph Peninsula State Park. (Photo provided by Xuan Chen)

Xuan loves conducting research and hopes to expand his conservation biology research into other ecosystems. Although he is still completing his Ph.D., he is interested in university-level teaching, hoping one day land his dream job: a university-level position consisting of “50% research and 50% teaching.”

Praise for Xuan

Hooper-Bui cites Xuan’s eagerness to grow as a scientist as a major contribution to his success. “I said he should write a proposal, and he’s written six to eight of them,” she says. “I explained to him that science is getting more and more collaborative, and he established collaborations all on his own with people who I don’t even know.”

Hooper-Bui also mentioned Xuan’s amazing communication skills. At the 2013 Gulf of Mexico Oil Spill and Ecosystem Conference, he was recruited by Sunshine Menendez, executive director of the Metcalf Institute for Marine and Environmental Reporting, to present a 30-minute talk for journalists on interpreting scientific data. Xuan generated his own presentation, which he used to engagingly communicate with the journalists. “He poked some fun at himself, saying ‘I’m sure you’re like here’s this Chinese guy and I’m not going to be able to understand him,’ and it immediately made them laugh and relax,” Hooper-Bui recalls. “It went better than anyone could have hoped!”

Xuan (not pictured) received a lot of helpful assistance from student workers Theresa Crupi (left) and Alexander Sabo (right). Here, they set traps in the trees at Jean Lafitte National Park and Preserve in order to collect ants. (Photo provided by Xuan Chen)

Xuan (not pictured) received a lot of helpful assistance from student workers Theresa Crupi (left) and Alexander Sabo (right). Here, they set traps in the trees at Jean Lafitte National Park and Preserve in order to collect ants. (Photo provided by Xuan Chen)

Finally, Hooper-Bui expressed ways that Xuan has influenced her own research. “He’s stretching me as a scientist,” she says. “I want him to graduate, but only because he’s just the kind of person I want as my colleague. He’s tireless, out there taking samples all day long. Had he not been there to help, there is no way I would be where I am in this research. He is the number one contributor to our oil spill data—he’s pivotal.”

The GoMRI community embraces bright and dedicated students like Xuan Chen and their important contributions. The GoMRI Scholars Programrecognizes graduate students whose work focuses on GoMRI-funded projects and builds community for the next generation of ocean science professionals.

Katie Oxford, a columnist for CultureMap – Houston, interviewed Xuan Chen and wrote a first-hand account of his marsh field work in her Tattered Jeans column: The Ant Man from the Louisiana Marsh – Meet My Chinese Hero.

Visit the CWC website to learn more about their work.

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This research was made possible in part by a grant from BP/The Gulf of Mexico Research Initiative (GoMRI) to theCoastal Waters Consortium (CWC). The GoMRI is a 10-year independent research program established to study the effect, and the potential associated impact, of hydrocarbon releases on the environment and public health, as well as to develop improved spill mitigation, oil detection, characterization and remediation technologies. An independent and academic 20-member Research Board makes the funding and research direction decisions to ensure the intellectual quality, effectiveness and academic independence of the GoMRI research. All research data, findings and publications will be made publicly available. The program was established through a $500 million financial commitment from BP. For more information, visit http://gulfresearchinitiative.org/.

Lesson Plan: A Bug’s Life – Gulf of Mexico Edition (Insects)

This experiment will test if the insects will die (i.e., the yellow color changing paper turning red once it comes in contact with a weak basic solution) once they have come in contact with crude oil through various exposure routes.

This experiment will test if the insects will die (i.e., the yellow color changing paper turning red once it comes in contact with a weak basic solution) once they have come in contact with crude oil through various exposure routes.

Many times, people think about the environmental impacts of an oil spill and the main organisms (impacted) that come to mind are marine mammals, crustaceans, fish, birds, and even mollusks. Insects are often forgotten, but some species are closely associated to soil and plant life; therefore, some insects are of high ecological value. Some insects live within the shoots of dead Spartina, directly exposed to marshes in which oil contamination has occurred. Researchers want to know what happens to some of these insects that are exposed to oil by various means (e.g., direct contact, inhalation, ingestion, etc.).

The most recent and notable offshore drilling incident was the BP Deepwater Horizon oil spill which was responsible for releasing millions of barrels of oil into the Gulf of Mexico and the surrounding coast.

Students will be re-enacting a methodology initiated by GoMRI researchers to identify insect abundance on oiled and unoiled plots of land. The weak basic solution (i.e., baking soda and water) will represent crude oil. Students will expose 2 out of 3 columns of insects to ‘oiled water’ that may be found in salt marshes along the Gulf coast.

Lesson Plan PDF – A-Bugs-Life-Gulf-of-Mexico-edition